Journal articles, peer-reviewed
- 2023
-
17. Gunnarsson, A., J. Kennedy, A. Magnusson, B. Bardarson, and
B. Elvarsson. Effect of formalin fixation on size and weight of Atlantic
wolffish (Anarhichas lupus) and spotted wolffish (Anarhichas
minor) oocytes. Fish. Res.
258:106515
- 2021
-
16. Melnychuk, M.C., H. Kurota, P.M. Mace, M. Pons, C. Minto, G.C. Osio,
O.P. Jensen, C.L. de Moor, A.M. Parma, L.R. Little, D. Hively, C.E.
Ashbrook, N. Baker, R.O. Amoroso, T.A. Branch, C.M. Anderson, C.S.
Szuwalski, J.K. Baum, T.R. McClanahan, Y. Ye, A. Ligas, J. Bensbai, G.G.
Thompson, J. DeVore, A. Magnusson, B. Bogstad, E. Wort, J.
Rice, and R. Hilborn. Identifying management actions that promote
sustainable fisheries. Nature Sustainability
4:440-449.
- 2020
-
15. Sharma, R., P. Levontin, T. Kitakado, L. Kell, I. Mosqueira, A. Kimoto,
R. Scott, C. Minte-Vera, P. de Bruyn, Y. Ye, J. Kleineberg, J.L. Walton, S.
Miller, and A. Magnusson. Operating model design in tuna
Regional Fishery Management Organizations: Current practice, issues and
implications. Fish and Fish.
21:940-961.
- 2018
-
14. Barua, S., A. Magnusson, and N.M. Humayun. Assessment of
offshore shrimp stocks of Bangladesh based on commercial shrimp trawl
logbook data. Indian J. Fish.
65:1-6.
- 2017
-
13. Brooks, M.E., K. Kristensen, K.J. van Benthem, A.
Magnusson, C.W. Berg, A. Nielsen, H.J. Skaug, M. Machler, and B.M.
Bolker. glmmTMB balances speed and flexibility among packages for
zero-inflated generalized linear mixed modeling. R Journal 9(2):378-400.
- 2016
-
12. Gudmundsson, K., K. Agustsdottir, N. McGinty, A. Magnusson,
H. Gudfinnsson, and G. Marteinsdottir. A regional correction model for
satellite surface chlorophyll concentrations, based on measurements from sea
water samples collected around Iceland. Methods Oceanogr.
17:83-96.
- 2014
-
11. Magnusson, A. and S.T. Jonsson. Fléttuð forritun og kvik
skjalagerð [Literate programming and dynamic generation of reports]. Tölvumál
[Icelandic Journal of Computing] 39:38-39 (with English abstract).
- 2013
-
10. Bolker, B.M., B. Gardner, M. Maunder, C.W. Berg, M. Brooks, L. Comita,
E. Crone, S. Cubaynes, T. Davies, P. de Valpine, J. Ford, O. Gimenez, M.
Kery, E. Kim, C. Lennert-Cody, A. Magnusson, S. Martell, J.
Nash, A. Nielsen, J. Regetz, H. Skaug, and E. Zipkin. Strategies for fitting
nonlinear ecological models in R, AD Model Builder, and BUGS. Methods Ecol. Evol.
4:501-512.
-
9. Derayat, A., A. Magnusson, A. Steinarsson, and B. Bjornsson.
Growth and gonadal development in diploid and triploid Atlantic cod
(Gadus morhua). Fish Physiol. Biochem.
39:1195-1203.
-
8. Jonsdottir, I.G., A. Magnusson, and U. Skuladottir.
Influence of increased cod abundance and temperature on recruitment of
northern shrimp (Pandalus borealis). Mar. Biol.
160:1203-1211.
-
7. Magnusson, A., A.E. Punt, and R. Hilborn. Measuring
uncertainty in fisheries stock assessment: the delta method, bootstrap, and
MCMC. Fish and
Fish. 14:325-342.
-
6. van der Hammen, T., J.J. Poos, H. van Overzee, H.J.L. Heessen, A.
Magnusson, and A.D. Rijnsdorp. Population ecology of turbot and
brill: what can we learn from two rare flatfish species? J. Sea Res.
84:96-108.
- 2012
-
5. Fournier, D.A., H.J. Skaug, J. Ancheta, J. Ianelli, A.
Magnusson, M.N. Maunder, A. Nielsen, and J. Sibert. AD Model Builder:
using automatic differentiation for statistical inference of highly
parameterized complex nonlinear models. Optim. Methods Softw.
27:233-249 (winner of Charles Broyden
Prize).
- 2011
-
4. Jakobsdottir, K.B., H. Pardoe, A. Magnusson, H. Bjornsson,
C. Pampoulie, D.E. Ruzzante, and G. Marteinsdottir. Historical changes in
genotypic frequencies at the Pantophysin locus in Atlantic cod
(Gadus morhua) in Icelandic waters: evidence of fisheries-induced
selection? Evol.
Appl. 4:562-573.
- 2007
-
3. Magnusson, A. and R. Hilborn. What makes fisheries data
informative? Fish
and Fish. 8:337-358 (with erratum).
- 2003
-
2. Hilborn, R., T.A. Branch, B. Ernst, A. Magnusson, C.V.
Minte-Vera, M.D. Scheuerell, and J.L. Valero. State of the world's
fisheries. Annu.
Rev. Environ. Resour. 28:359-399.
-
1. Magnusson, A. and R. Hilborn. Estuarine influence on
survival rates of coho (Oncorhynchus kisutch) and chinook salmon
(Oncorhynchus tshawytscha) released from hatcheries on the U.S.
Pacific coast. Estuaries
26:1094-1103.
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